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GEO accession:
Sample GSM139607
Query DataSets for GSM139607
Status
Public on Dec 19, 2008
Title
HB70
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T3
Node: N1
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.020073811143
117_3p_at
7.91173102306128
1494_3p_f_at
7.5700793392091
1552275_3p_s_at
7.47758108981209
1552281_3p_at
9.48682922225368
1552296_3p_at
5.87949623101774
1552302_3p_at
6.39609178425154
1552311_3p_a_at
8.63844181085409
1552321_3p_a_at
4.87843244007792
1552340_3p_at
6.88030309699266
1552343_3p_s_at
7.14378041310726
1552354_3p_at
7.82965470382797
1552476_3p_s_at
7.72874059183346
1552480_3p_s_at
3.40766618217865
1552504_3p_a_at
7.85902718652764
1552518_3p_s_at
6.22971719750598
1552528_3p_at
8.56862013083194
1552535_3p_at
8.03506754618004
1552566_3p_at
6.82802689017464
1552575_3p_a_at
7.60291245592569
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139607.cel.gz
8.8 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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