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GEO accession:
Sample GSM139609
Query DataSets for GSM139609
Status
Public on Dec 19, 2008
Title
HB72
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : Ep
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.28024185172632
117_3p_at
7.52231876010134
1494_3p_f_at
7.59575322322215
1552275_3p_s_at
7.80448709483975
1552281_3p_at
9.14976073524615
1552296_3p_at
6.3673787294316
1552302_3p_at
5.69269306266716
1552311_3p_a_at
8.2864269025107
1552321_3p_a_at
4.91358217946783
1552340_3p_at
6.44088498747605
1552343_3p_s_at
7.20982731107245
1552354_3p_at
7.32727863603569
1552476_3p_s_at
7.6495138016466
1552480_3p_s_at
3.4660830582769
1552504_3p_a_at
7.73697354316203
1552518_3p_s_at
5.88484859370372
1552528_3p_at
8.2860181912195
1552535_3p_at
7.78060245126884
1552566_3p_at
6.57250394175614
1552575_3p_a_at
8.08087014433965
Total number of rows:
61297
Table truncated, full table size
2187 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139609.cel.gz
8.5 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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