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GEO accession:
Sample GSM139610
Query DataSets for GSM139610
Status
Public on Dec 19, 2008
Title
HB73
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.13923069178675
117_3p_at
7.60393430049497
1494_3p_f_at
7.4773223582772
1552275_3p_s_at
7.40378360449836
1552281_3p_at
9.37503776879587
1552296_3p_at
6.33607076247177
1552302_3p_at
6.69026453725944
1552311_3p_a_at
8.42899263503662
1552321_3p_a_at
4.78174308027373
1552340_3p_at
6.44418923374796
1552343_3p_s_at
7.19712194372103
1552354_3p_at
7.32753515310861
1552476_3p_s_at
7.45842228106951
1552480_3p_s_at
3.79193893361221
1552504_3p_a_at
7.40620581986952
1552518_3p_s_at
5.89466885511688
1552528_3p_at
8.21183412785611
1552535_3p_at
7.84100175732706
1552566_3p_at
6.27482345419123
1552575_3p_a_at
7.18806560775048
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139610.cel.gz
8.9 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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