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Sample GSM139615 Query DataSets for GSM139615
Status Public on Dec 19, 2008
Title HB78
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T3
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.15602098518722
117_3p_at 7.56957609164711
1494_3p_f_at 7.64229688062115
1552275_3p_s_at 7.43848821917167
1552281_3p_at 9.12309668869607
1552296_3p_at 5.01846374176262
1552302_3p_at 5.7982224703895
1552311_3p_a_at 8.09933059205121
1552321_3p_a_at 4.5428890364182
1552340_3p_at 6.6841987672488
1552343_3p_s_at 6.92997549649675
1552354_3p_at 7.9131002149042
1552476_3p_s_at 7.88925243930661
1552480_3p_s_at 4.06741676064432
1552504_3p_a_at 7.39637491103878
1552518_3p_s_at 5.92803401615605
1552528_3p_at 7.97977148917644
1552535_3p_at 7.87379675909115
1552566_3p_at 6.4622447604702
1552575_3p_a_at 7.66691731763712

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139615.cel.gz 9.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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