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Sample GSM139616 Query DataSets for GSM139616
Status Public on Dec 19, 2008
Title HB79
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T1
Node: N2
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.6065429258285
117_3p_at 7.47866494525009
1494_3p_f_at 7.37576131295512
1552275_3p_s_at 7.57367988387694
1552281_3p_at 9.06236638440501
1552296_3p_at 6.07053815233833
1552302_3p_at 6.38961051368305
1552311_3p_a_at 8.52607248253825
1552321_3p_a_at 4.82004969635165
1552340_3p_at 6.46930692097287
1552343_3p_s_at 7.20298304954315
1552354_3p_at 7.47962124603434
1552476_3p_s_at 7.32278376702612
1552480_3p_s_at 4.46198506241524
1552504_3p_a_at 7.59225715944155
1552518_3p_s_at 5.8453012828673
1552528_3p_at 8.05344340959336
1552535_3p_at 7.89011809444154
1552566_3p_at 6.40128021789293
1552575_3p_a_at 8.112182503171

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139616.cel.gz 8.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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