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Sample GSM139620 Query DataSets for GSM139620
Status Public on Dec 19, 2008
Title HB83
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.45595155041784
117_3p_at 7.74245417542005
1494_3p_f_at 7.85244511634271
1552275_3p_s_at 8.40824895385055
1552281_3p_at 9.05668660280873
1552296_3p_at 5.89362161700255
1552302_3p_at 5.87843093316219
1552311_3p_a_at 8.31764965128912
1552321_3p_a_at 4.91911027261228
1552340_3p_at 6.46152606314117
1552343_3p_s_at 6.80896667167595
1552354_3p_at 7.23350869537667
1552476_3p_s_at 7.42845104697573
1552480_3p_s_at 3.45551791109059
1552504_3p_a_at 7.60850266958736
1552518_3p_s_at 5.83107333697411
1552528_3p_at 8.04304400555226
1552535_3p_at 7.82662924203345
1552566_3p_at 6.36551806778122
1552575_3p_a_at 7.9318328168491

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139620.cel.gz 8.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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