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GEO accession:
Sample GSM139623
Query DataSets for GSM139623
Status
Public on Dec 19, 2008
Title
HB86
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T-
Node: N-
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.99929282167349
117_3p_at
7.4570920139546
1494_3p_f_at
7.52968904289932
1552275_3p_s_at
7.74108154454503
1552281_3p_at
9.34797140721083
1552296_3p_at
5.8562718880489
1552302_3p_at
5.09792644513181
1552311_3p_a_at
7.7529177599256
1552321_3p_a_at
4.84744315816042
1552340_3p_at
6.4888167940684
1552343_3p_s_at
7.56830924054014
1552354_3p_at
7.3492438885353
1552476_3p_s_at
7.49651248942206
1552480_3p_s_at
3.63222834232414
1552504_3p_a_at
7.2953186499643
1552518_3p_s_at
5.78463651918739
1552528_3p_at
8.23060439507379
1552535_3p_at
7.89729586764965
1552566_3p_at
6.5647607447955
1552575_3p_a_at
7.96846782998187
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139623.cel.gz
8.8 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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