|
Status |
Public on Nov 11, 2014 |
Title |
OC2-WT adult 1 |
Sample type |
RNA |
|
|
Source name |
OC2-WT adult retina
|
Organism |
Mus musculus |
Characteristics |
tissue: retina Stage: adult onecut genotype: WT
|
Treatment protocol |
Retinas were isolated from adult eyes and rinsed in 1X PBS.
|
Growth protocol |
Littermates were allowed to develop normally in utero until maturity
|
Extracted molecule |
total RNA |
Extraction protocol |
Trireagent extraction of total RNA was performed according to the manufacturer's instructions.
|
Label |
biotin
|
Label protocol |
Total RNA wa amplified, biotinylated, and fragmented using the Ambion MessageAmp III RNA amplification kit according to manufacturer's instructions.
|
|
|
Hybridization protocol |
Amplified RNA was hybridized to Affymetrix GeneChip Mouse Genome 430 2.0 arrays at the Iowa State University GeneChip Facility.
|
Scan protocol |
Amplified RNA was scanned from Affymetrix GeneChip Mouse Genome 430 2.0 arrays at the Iowa State University GeneChip Facility.
|
Description |
Gene expression information from isolated adult retinas
|
Data processing |
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
|
|
|
Submission date |
May 22, 2014 |
Last update date |
Nov 11, 2014 |
Contact name |
Jeffrey M Trimarchi |
E-mail(s) |
jtrimarc@iastate.edu
|
Phone |
2172190210
|
Organization name |
Iowa State University
|
Department |
GDCB
|
Lab |
Trimarchi
|
Street address |
3188 Molecular Biology Building
|
City |
Ames |
State/province |
IA |
ZIP/Postal code |
50014 |
Country |
USA |
|
|
Platform ID |
GPL1261 |
Series (1) |
GSE57918 |
Expression data from adult Onecut2 WT and KO animals |
|