|
| Status |
Public on May 18, 2015 |
| Title |
80_PR |
| Sample type |
RNA |
| |
|
| Source name |
patients experienced PR with cisplatin based chemotherapy
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: lung squamous cell carcinoma
phenotype: partial response with cisplatin based chemotherapy
|
| Treatment protocol |
lung SCC from patients having either partial response or progressive disease after cisplatin based chemotherapy
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was extracted with Trizol
|
| Label |
Cy3
|
| Label protocol |
according to the Agilent One-Color Microarray-Based Gene Expression Analysis protocol (Agilent Technologies, Santa Clara, USA) with minor modifications
|
| |
|
| Hybridization protocol |
according to the Agilent One-Color Microarray-Based Gene Expression Analysis protocol (Agilent Technologies, Santa Clara, USA) with minor modifications.
|
| Scan protocol |
scanned with using the Agilent DNA Microarray Scanner (part number G2505C)
|
| Data processing |
Agilent Feature Extraction software (version 11.0.1.1) was used to analyze acquired array images. Quantile normalization and subsequent data processing were performed with using the GeneSpring GX v11.5.1 software package (Agilent Technologies, Santa Clara, USA)
|
| |
|
| Submission date |
Jul 09, 2014 |
| Last update date |
May 18, 2015 |
| Contact name |
Xuefeng Fang |
| E-mail(s) |
xffang@zju.edu.cn
|
| Organization name |
Zhejiang University
|
| Department |
College of Medcine
|
| Street address |
86 jiefang road
|
| City |
Hangzhou |
| ZIP/Postal code |
210009 |
| Country |
China |
| |
|
| Platform ID |
GPL16956 |
| Series (1) |
| GSE59245 |
Long noncoding RNAs expression patterns associated with chemo response to cisplatin based chemotherapy in lung squamous cell carcinoma patients |
|
