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Sample GSM143412 Query DataSets for GSM143412
Status Public on Jan 01, 2007
Title Muscle Control 3
Sample type RNA
 
Source name Quadriceps muscle, control mouse
Organism Mus musculus
Characteristics Strain: C57BL/6; Tissue: quadriceps muscle
Extracted molecule total RNA
Extraction protocol RNA was extracted using the Qiagen RNeasy Midi Kit according to manufacturer guidelines
Label biotin
Label protocol Standard Affymetrix procedures
 
Hybridization protocol Standard Affymetrix procedures
Scan protocol Standard Affymetrix procedures using a confocal laser scanner
Description third control, M. quadriceps sample
Data processing Micoarray analysis was performed using dChip software
 
Submission date Nov 01, 2006
Last update date Aug 28, 2018
Contact name Michael Huntgeburth
E-mail(s) mhuntgeb@bidmc.harvard.edu
Phone 1-617-667-3043
Organization name Beth Israel Deaconess Medical Center
Department Endocrinology, Diabetes and Metabolism
Lab Prof. Bradford B. Lowell
Street address 99 Brookline Ave.
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE6210 Hypomorphic Mutation in PGC1beta causes mitochondrial dysfunction and liver insulin resistance
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE signal intensity
ABS_CALL absence or presence
DETECTION P-VALUE significance

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 202.4 P 0.000297
AFFX-BioB-M_at 269.4 P 0.000044
AFFX-BioB-3_at 163.8 P 0.00011
AFFX-BioC-5_at 494.1 P 0.00007
AFFX-BioC-3_at 386.8 P 0.000052
AFFX-BioDn-5_at 595.6 P 0.000044
AFFX-BioDn-3_at 2299.8 P 0.000044
AFFX-CreX-5_at 5924.7 P 0.000044
AFFX-CreX-3_at 6839.8 P 0.000044
AFFX-DapX-5_at 1.6 A 0.559354
AFFX-DapX-M_at 4.2 A 0.48511
AFFX-DapX-3_at 3.2 A 0.645559
AFFX-LysX-5_at 5.5 A 0.216524
AFFX-LysX-M_at 2.1 A 0.617401
AFFX-LysX-3_at 16.1 P 0.006187
AFFX-PheX-5_at 1.5 A 0.883887
AFFX-PheX-M_at 0.5 A 0.981719
AFFX-PheX-3_at 7.7 A 0.455413
AFFX-ThrX-5_at 2.3 A 0.712257
AFFX-ThrX-M_at 1.5 A 0.737173

Total number of rows: 45101

Table truncated, full table size 1185 Kbytes.




Supplementary file Size Download File type/resource
GSM143412.CEL.gz 5.9 Mb (ftp)(http) CEL

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