|
| Status |
Public on Jul 12, 2014 |
| Title |
Colonized with microbiota from loperamide-treated mouse, replicate 3 |
| Sample type |
RNA |
| |
|
| Source name |
smooth muscle
|
| Organism |
Mus musculus |
| Characteristics |
group: C/+Lop
tissue: smooth muscle of proximal colon
genotype: wild type
strain: C57Bl/6
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
|
| Label |
biotin
|
| Label protocol |
standard Illumina protocol
|
| |
|
| Hybridization protocol |
standard Illumina protocol
|
| Scan protocol |
standard Illumina protocol
|
| Description |
Prox15
|
| Data processing |
raw data were processed using the R/Bioconductor package limma for background correction and quantile normalization
|
| |
|
| Submission date |
Jul 10, 2014 |
| Last update date |
Jul 12, 2014 |
| Contact name |
Yong Huang |
| E-mail(s) |
yh9fj@virginia.edu
|
| Phone |
(434) 243-0842
|
| Organization name |
University of Viginia
|
| Department |
Medicine
|
| Street address |
1340 Jefferson Park Ave
|
| City |
Charlottesville |
| State/province |
VA |
| ZIP/Postal code |
22908 |
| Country |
USA |
| |
|
| Platform ID |
GPL6885 |
| Series (1) |
| GSE59320 |
Mutual reinforcement of pathophysiological host-microbe interactions that maintain steady state conditions of disease |
|
