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Sample GSM1435702 Query DataSets for GSM1435702
Status Public on Jul 12, 2014
Title Testis_TgMsi1_rep1
Sample type RNA
 
Source name Mouse testis
Organism Mus musculus
Characteristics strain: B6xCBA
age: 3 months
tissue: testis
genotype/variation: TgMsi1
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from samples using a QIAGEN RNeasy Mini Kit (Hilden, Germany). The quality and quantity of mouse total RNA was ascertained on the Agilent Bioanalyser 2100.
Label Cy3
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description comparison 1
Data processing GenomeStudio was used to convert the signal on the array into a TXT file for analysis
 
Submission date Jul 11, 2014
Last update date Jul 12, 2014
Contact name Jessie M Sutherland
E-mail(s) jessie.sutherland@newcastle.edu.au
Organization name University of Newcastle
Street address University Drive
City Callaghan
ZIP/Postal code 2304
Country Australia
 
Platform ID GPL6885
Series (1)
GSE59358 Microarray analysis of differential gene expression of whole testis extracts from transgenic Musashi-2 and transgenic Musashi-1 over-expression mice

Data table header descriptions
ID_REF
VALUE log transformed and normalized intensity

Data table
ID_REF VALUE
ILMN_2896528 10.03721375
ILMN_2721178 8.490071345
ILMN_3033922 9.822554286
ILMN_3092673 11.69711658
ILMN_2816356 7.929882368
ILMN_2808939 9.286364779
ILMN_2634564 9.280254389
ILMN_2737647 7.665056812
ILMN_2734484 10.36580124
ILMN_2952292 7.721090037
ILMN_2699078 7.505693119
ILMN_1213681 9.958689767
ILMN_2735413 7.625611527
ILMN_2735415 7.670792199
ILMN_2891688 9.924486075
ILMN_2637698 9.269266738
ILMN_2674228 8.363608464
ILMN_2601546 7.730954307
ILMN_1230831 7.557129295
ILMN_2848071 7.786923816

Total number of rows: 25697

Table truncated, full table size 624 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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