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Sample GSM1435706 Query DataSets for GSM1435706
Status Public on Jul 12, 2014
Title Testis_Wt(TgMsi1)_rep1
Sample type RNA
 
Source name Mouse testis
Organism Mus musculus
Characteristics strain: B6xCBA
age: 3 months
tissue: testis
genotype/variation: Wt(TgMsi1)
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from samples using a QIAGEN RNeasy Mini Kit (Hilden, Germany). The quality and quantity of mouse total RNA was ascertained on the Agilent Bioanalyser 2100.
Label Cy3
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description comparison 1
Data processing GenomeStudio was used to convert the signal on the array into a TXT file for analysis
 
Submission date Jul 11, 2014
Last update date Jul 12, 2014
Contact name Jessie M Sutherland
E-mail(s) jessie.sutherland@newcastle.edu.au
Organization name University of Newcastle
Street address University Drive
City Callaghan
ZIP/Postal code 2304
Country Australia
 
Platform ID GPL6885
Series (1)
GSE59358 Microarray analysis of differential gene expression of whole testis extracts from transgenic Musashi-2 and transgenic Musashi-1 over-expression mice

Data table header descriptions
ID_REF
VALUE log transformed and normalized intensity

Data table
ID_REF VALUE
ILMN_2896528 9.4243945
ILMN_2721178 8.131115379
ILMN_3033922 9.717425532
ILMN_3092673 11.60135255
ILMN_2816356 8.093803837
ILMN_2808939 9.298575822
ILMN_2634564 9.447799933
ILMN_2737647 7.674398741
ILMN_2734484 10.28595619
ILMN_2952292 7.643263377
ILMN_2699078 7.499976134
ILMN_1213681 10.10775015
ILMN_2735413 7.540733056
ILMN_2735415 7.654468529
ILMN_2891688 9.869607209
ILMN_2637698 9.432257572
ILMN_2674228 8.205637527
ILMN_2601546 7.809188435
ILMN_1230831 7.64213499
ILMN_2848071 7.73810748

Total number of rows: 25697

Table truncated, full table size 624 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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