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Sample GSM1435712 Query DataSets for GSM1435712
Status Public on Jul 12, 2014
Title Testis_TgMsi2_rep3
Sample type RNA
 
Source name Mouse testis
Organism Mus musculus
Characteristics strain: B6xCBA
age: 3 months
tissue: testis
genotype/variation: TgMsi2
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from samples using a QIAGEN RNeasy Mini Kit (Hilden, Germany). The quality and quantity of mouse total RNA was ascertained on the Agilent Bioanalyser 2100.
Label Cy3
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description comparison 2
Data processing GenomeStudio was used to convert the signal on the array into a TXT file for analysis
 
Submission date Jul 11, 2014
Last update date Jul 12, 2014
Contact name Jessie M Sutherland
E-mail(s) jessie.sutherland@newcastle.edu.au
Organization name University of Newcastle
Street address University Drive
City Callaghan
ZIP/Postal code 2304
Country Australia
 
Platform ID GPL6885
Series (1)
GSE59358 Microarray analysis of differential gene expression of whole testis extracts from transgenic Musashi-2 and transgenic Musashi-1 over-expression mice

Data table header descriptions
ID_REF
VALUE log transformed and normalized intensity

Data table
ID_REF VALUE
ILMN_2896528 10.38741284
ILMN_2721178 8.604330805
ILMN_3033922 10.31886901
ILMN_3092673 12.15672264
ILMN_2816356 7.95491348
ILMN_2808939 9.540869284
ILMN_2634564 9.336864247
ILMN_2737647 7.659384224
ILMN_2734484 10.0875332
ILMN_2952292 7.750399778
ILMN_2699078 7.531085417
ILMN_1213681 9.855858817
ILMN_2735413 7.633841623
ILMN_2735415 7.805150835
ILMN_2891688 10.05389124
ILMN_2637698 9.596751895
ILMN_2674228 8.431265032
ILMN_2601546 7.776683422
ILMN_1230831 7.582533284
ILMN_2848071 7.724788976

Total number of rows: 25697

Table truncated, full table size 624 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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