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Sample GSM146208 Query DataSets for GSM146208
Status Public on Sep 08, 2011
Title cortex_wildtype_replicate 1 A Chip
Sample type RNA
 
Source name mouse P7 cortex
Organism Mus musculus
Characteristics BRCA1 conditional knockout or wildtype cortex
Extracted molecule total RNA
Extraction protocol TRIZOL
Label Standard Affymetrix Protocol
Label protocol Standard Affymetrix Protocol
 
Hybridization protocol Standard Affymetrix Protocol
Scan protocol Standard Affymetrix Protocol
Description Standard Affymetrix Protocol
Data processing Only intensity values called Present were considered and values were processed using default MAS 5.0 parameters.
 
Submission date Nov 17, 2006
Last update date Sep 08, 2011
Contact name Gerald M Pao
E-mail(s) pao@salk.edu
Phone (858)4534100 X1125
Fax (858) 5587454
URL http://www.salk.edu
Organization name Salk Institute
Department Laboratory of Genetics
Lab Verma
Street address 10010 North Torrey Pines
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platform ID GPL8321
Series (1)
GSE6310 Brain BRCA1 conditional knockout

Data table header descriptions
ID_REF
SIGNAL_RAW Raw signal intensity
VALUE Signal of probes called present

Data table
ID_REF SIGNAL_RAW VALUE
AFFX-BioB-5_at 59.1 59.1
AFFX-BioB-M_at 114.9 114.9
AFFX-BioB-3_at 61.6 61.6
AFFX-BioC-5_at 347.4 347.4
AFFX-BioC-3_at 238.2 238.2
AFFX-BioDn-5_at 477.3 477.3
AFFX-BioDn-3_at 1398 1398
AFFX-CreX-5_at 2721.3 2721.3
AFFX-CreX-3_at 3131.2 3131.2
AFFX-DapX-5_at 173.5 173.5
AFFX-DapX-M_at 338.2 338.2
AFFX-DapX-3_at 365.9 365.9
AFFX-LysX-5_at 174.1 174.1
AFFX-LysX-M_at 255.9 255.9
AFFX-LysX-3_at 257.2 257.2
AFFX-PheX-5_at 315.4 315.4
AFFX-PheX-M_at 297 297
AFFX-PheX-3_at 380.2 380.2
AFFX-ThrX-5_at 333.2 333.2
AFFX-ThrX-M_at 319 319

Total number of rows: 22690

Table truncated, full table size 453 Kbytes.




Supplementary file Size Download File type/resource
GSM146208.CEL.gz 2.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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