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Sample GSM147148 Query DataSets for GSM147148
Status Public on Nov 29, 2006
Title 1412082023C_Parent2
Sample type RNA
 
Source name EBV-transformed cell line of lymphoblasts extrated from peripheral blood
Organism Homo sapiens
Characteristics Immortalized lymphoblastoid cell line
Treatment protocol No treatment
Growth protocol RPMI-1640 medium (Invitrogen, Inc., Carlsbad, CA), containing 2 mmol/L L-glutamine, 100 ug/ml streptomycin, and 10% fetal calf serum
Extracted molecule total RNA
Extraction protocol Trizol reagent (Invitrogen, Inc.)
Label Biotin-Labeled cRNA
Label protocol Illlumina® TotalPrep RNA amplification kit, manufactured by Ambion, Inc (Austin, TX) according to the manufacturer’s protocol
 
Hybridization protocol Refer to the Illumina Gene Expression System Manual
Scan protocol Refer to the Illumina Gene Expression System Manual
Description Comparison of genome-wide expression in EBV-transformed lymphoblastoid cell lines of patients and controls
Data processing Raw data for each sample was output using the Illumina BeadStudio
 
Submission date Nov 27, 2006
Last update date Nov 28, 2006
Contact name Yelena Bykhovskaya
Organization name Cedars-Sinai Medical Center
Street address 8700 Beverly Blvd
City Los Angeles
State/province CA
ZIP/Postal code 90048
Country USA
 
Platform ID GPL2507
Series (1)
GSE6374 Lymphoblastoid cell lines of families with Mitochondrial Myopathy and Sideroblastic Anemia

Data table header descriptions
ID_REF
VALUE Average Signal output by Illumina Inc. BeadStudio version 1.5.0.34, Normalization = Background, Error model = none

Data table
ID_REF VALUE
GI_10047089-S -9.3
GI_10047091-S 18.9
GI_10047093-S 356.8
GI_10047099-S 125.7
GI_10047103-S 2033.7
GI_10047105-S 4.4
GI_10047121-S -3.6
GI_10047123-S 332
GI_10047133-A -8
GI_10047133-I 5.4
GI_10092578-S -7
GI_10092585-S 54.3
GI_10092596-S 63.9
GI_10092600-S 447
GI_10092602-S 1.1
GI_10092603-S 4.7
GI_10092611-A 156.2
GI_10092616-S 1.6
GI_10092618-S 3890.5
GI_10092638-S 17.7

Total number of rows: 47293

Table truncated, full table size 810 Kbytes.




Supplementary data files not provided

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