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GEO accession:
Sample GSM147468
Query DataSets for GSM147468
Status
Public on Dec 02, 2006
Title
Emd KO male 3
Sample type
RNA
Source name
whole heart
Organism
Mus musculus
Characteristics
C57BL6
Extracted molecule
total RNA
Extraction protocol
RNA was extracted using Rneasy kit (QIAGEN)
Label
biotin
Label protocol
standard Affymetrix procedures
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
10 weeks
Data processing
GC-RMA
Submission date
Nov 29, 2006
Last update date
Aug 28, 2018
Contact name
antoine Muchir
E-mail(s)
am2434@columbia.edu
Phone
212 305 4088
Organization name
columbia university
Department
Medicine
Street address
630W 168th street
City
New York
State/province
NY
ZIP/Postal code
10032
Country
USA
Platform ID
GPL1261
Series (1)
GSE6399
Comparison between gene expression in heart from Emd KO and control mice
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
signal intensity
ABS_CALL
absent or present
DETECTION P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
1323.2
P
0.000127
AFFX-BioB-M_at
2580.1
P
0.000044
AFFX-BioB-3_at
1332.4
P
0.000052
AFFX-BioC-5_at
4347
P
0.000044
AFFX-BioC-3_at
3148
P
0.000044
AFFX-BioDn-5_at
6058.1
P
0.000044
AFFX-BioDn-3_at
18264.1
P
0.000044
AFFX-CreX-5_at
38327.2
P
0.000052
AFFX-CreX-3_at
39294.4
P
0.000044
AFFX-DapX-5_at
21.5
A
0.382599
AFFX-DapX-M_at
4.8
A
0.804734
AFFX-DapX-3_at
22
A
0.287743
AFFX-LysX-5_at
0.9
A
0.737173
AFFX-LysX-M_at
11.8
A
0.686277
AFFX-LysX-3_at
2.9
A
0.672921
AFFX-PheX-5_at
4.7
A
0.834139
AFFX-PheX-M_at
2.1
A
0.932322
AFFX-PheX-3_at
107.1
A
0.108979
AFFX-ThrX-5_at
33.9
A
0.52976
AFFX-ThrX-M_at
7.7
A
0.58865
Total number of rows:
45101
Table truncated, full table size
1205 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM147468.CEL.gz
5.7 Mb
(ftp)
(http)
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