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GEO accession:
Sample GSM147469
Query DataSets for GSM147469
Status
Public on Dec 02, 2006
Title
Emd KO male 4
Sample type
RNA
Source name
whole heart
Organism
Mus musculus
Characteristics
C57BL6
Extracted molecule
total RNA
Extraction protocol
RNA was extracted using Rneasy kit (QIAGEN)
Label
biotin
Label protocol
standard Affymetrix procedures
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
10 weeks
Data processing
GC-RMA
Submission date
Nov 29, 2006
Last update date
Aug 28, 2018
Contact name
antoine Muchir
E-mail(s)
am2434@columbia.edu
Phone
212 305 4088
Organization name
columbia university
Department
Medicine
Street address
630W 168th street
City
New York
State/province
NY
ZIP/Postal code
10032
Country
USA
Platform ID
GPL1261
Series (1)
GSE6399
Comparison between gene expression in heart from Emd KO and control mice
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
signal intensity
ABS_CALL
absent or present
DETECTION P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
1022.1
P
0.00011
AFFX-BioB-M_at
1681.9
P
0.000044
AFFX-BioB-3_at
812.8
P
0.000044
AFFX-BioC-5_at
3936.6
P
0.000052
AFFX-BioC-3_at
2935.4
P
0.000044
AFFX-BioDn-5_at
4873.2
P
0.000044
AFFX-BioDn-3_at
14257.6
P
0.000044
AFFX-CreX-5_at
28263.6
P
0.000044
AFFX-CreX-3_at
28341.3
P
0.000044
AFFX-DapX-5_at
3.1
A
0.672977
AFFX-DapX-M_at
27.2
A
0.41138
AFFX-DapX-3_at
24.8
A
0.382599
AFFX-LysX-5_at
1.6
A
0.910522
AFFX-LysX-M_at
20.9
A
0.672921
AFFX-LysX-3_at
18.6
M
0.054213
AFFX-PheX-5_at
1.6
A
0.957038
AFFX-PheX-M_at
4.2
A
0.932322
AFFX-PheX-3_at
13.4
A
0.617401
AFFX-ThrX-5_at
3.8
A
0.87651
AFFX-ThrX-M_at
5.3
A
0.617401
Total number of rows:
45101
Table truncated, full table size
1203 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM147469.CEL.gz
5.9 Mb
(ftp)
(http)
CEL
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