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GEO accession:
Sample GSM147481
Query DataSets for GSM147481
Status
Public on Dec 02, 2006
Title
Emd KO male 5
Sample type
RNA
Source name
whole heart
Organism
Mus musculus
Characteristics
C57BL6
Extracted molecule
total RNA
Extraction protocol
RNA was extracted using Rneasy kit (QIAGEN)
Label
biotin
Label protocol
standard Affymetrix procedures
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
10 weeks
Data processing
GC-RMA
Submission date
Nov 29, 2006
Last update date
Aug 28, 2018
Contact name
antoine Muchir
E-mail(s)
am2434@columbia.edu
Phone
212 305 4088
Organization name
columbia university
Department
Medicine
Street address
630W 168th street
City
New York
State/province
NY
ZIP/Postal code
10032
Country
USA
Platform ID
GPL1261
Series (1)
GSE6399
Comparison between gene expression in heart from Emd KO and control mice
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
signal intensity
ABS_CALL
absent or present
DETECTION P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
3055.5
P
0.000081
AFFX-BioB-M_at
5365.8
P
0.000044
AFFX-BioB-3_at
2419.7
P
0.000044
AFFX-BioC-5_at
11481.7
P
0.000044
AFFX-BioC-3_at
8114.7
P
0.000044
AFFX-BioDn-5_at
13919
P
0.000044
AFFX-BioDn-3_at
36383.5
P
0.000044
AFFX-CreX-5_at
65940
P
0.000044
AFFX-CreX-3_at
71647
P
0.000044
AFFX-DapX-5_at
39.3
A
0.287726
AFFX-DapX-M_at
41.3
A
0.631562
AFFX-DapX-3_at
45.9
A
0.699394
AFFX-LysX-5_at
24.3
A
0.5
AFFX-LysX-M_at
12.1
A
0.860518
AFFX-LysX-3_at
40.2
P
0.030931
AFFX-PheX-5_at
31.4
A
0.313723
AFFX-PheX-M_at
6.7
A
0.883887
AFFX-PheX-3_at
16.9
A
0.712257
AFFX-ThrX-5_at
9.3
A
0.987453
AFFX-ThrX-M_at
18
A
0.645559
Total number of rows:
45101
Table truncated, full table size
1208 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM147481.CEL.gz
5.7 Mb
(ftp)
(http)
CEL
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