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Sample GSM147506 Query DataSets for GSM147506
Status Public on Dec 02, 2006
Title Lmna H222P heterozygous male 1
Sample type RNA
 
Source name whole heart
Organism Mus musculus
Characteristics C57BL6
Extracted molecule total RNA
Extraction protocol RNA was extracted using Rneasy kit (QIAGEN)
Label biotin
Label protocol standard Affymetrix procedures
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description 10 weeks
Data processing GC-RMA
 
Submission date Nov 29, 2006
Last update date Aug 28, 2018
Contact name antoine Muchir
E-mail(s) am2434@columbia.edu
Phone 212 305 4088
Organization name columbia university
Department Medicine
Street address 630W 168th street
City New York
State/province NY
ZIP/Postal code 10032
Country USA
 
Platform ID GPL1261
Series (2)
GSE6397 Comparison between gene expression in heart from Lmna H222P heterozygous and control mice
GSE8000 Activation of MAPK pathways links LMNA mutations to cardiomyopathy in Emery-Dreifuss muscular dystrophy
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE signal intensity
ABS_CALL absent or present
DETECTION P-VALUE p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 297.3 P 0.000857
AFFX-BioB-M_at 360.4 P 0.000052
AFFX-BioB-3_at 163.7 P 0.001102
AFFX-BioC-5_at 1066 P 0.000044
AFFX-BioC-3_at 750.9 P 0.000052
AFFX-BioDn-5_at 1417.3 P 0.000044
AFFX-BioDn-3_at 5382.3 P 0.000044
AFFX-CreX-5_at 11547.7 P 0.000044
AFFX-CreX-3_at 14146.9 P 0.000044
AFFX-DapX-5_at 1.7 A 0.814869
AFFX-DapX-M_at 2.6 A 0.868639
AFFX-DapX-3_at 3.9 A 0.794268
AFFX-LysX-5_at 2 A 0.897835
AFFX-LysX-M_at 2.9 A 0.949771
AFFX-LysX-3_at 11 A 0.262827
AFFX-PheX-5_at 2.5 A 0.58862
AFFX-PheX-M_at 1.6 A 0.963443
AFFX-PheX-3_at 20.1 A 0.5
AFFX-ThrX-5_at 7.5 A 0.52976
AFFX-ThrX-M_at 3.7 A 0.834139

Total number of rows: 45101

Table truncated, full table size 1203 Kbytes.




Supplementary file Size Download File type/resource
GSM147506.CEL.gz 5.9 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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