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Sample GSM147509 Query DataSets for GSM147509
Status Public on Dec 02, 2006
Title Lmna H222P heterozygous male 3
Sample type RNA
Source name whole heart
Organism Mus musculus
Characteristics C57BL6
Extracted molecule total RNA
Extraction protocol RNA was extracted using Rneasy kit (QIAGEN)
Label biotin
Label protocol standard Affymetrix procedures
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description 10 weeks
Data processing GC-RMA
Submission date Nov 29, 2006
Last update date Aug 28, 2018
Contact name antoine Muchir
Phone 212 305 4088
Organization name columbia university
Department Medicine
Street address 630W 168th street
City New York
State/province NY
ZIP/Postal code 10032
Country USA
Platform ID GPL1261
Series (2)
GSE6397 Comparison between gene expression in heart from Lmna H222P heterozygous and control mice
GSE8000 Activation of MAPK pathways links LMNA mutations to cardiomyopathy in Emery-Dreifuss muscular dystrophy
Reanalyzed by GSE119085

Data table header descriptions
VALUE signal intensity
ABS_CALL absent or present
DETECTION P-VALUE p-value that indicates the significance level of the detection call

Data table
AFFX-BioB-5_at 389 P 0.001102
AFFX-BioB-M_at 563.3 P 0.000225
AFFX-BioB-3_at 242.4 P 0.000095
AFFX-BioC-5_at 1188.5 P 0.000052
AFFX-BioC-3_at 1001.8 P 0.000052
AFFX-BioDn-5_at 1792.5 P 0.000044
AFFX-BioDn-3_at 5213.3 P 0.00006
AFFX-CreX-5_at 14373 P 0.000044
AFFX-CreX-3_at 16760.7 P 0.000044
AFFX-DapX-5_at 10.7 A 0.425956
AFFX-DapX-M_at 45.2 A 0.275146
AFFX-DapX-3_at 18.4 A 0.737173
AFFX-LysX-5_at 34.5 A 0.116113
AFFX-LysX-M_at 5.9 A 0.749204
AFFX-LysX-3_at 22.3 A 0.368438
AFFX-PheX-5_at 3.6 A 0.852061
AFFX-PheX-M_at 4.8 A 0.9273
AFFX-PheX-3_at 44.5 A 0.313723
AFFX-ThrX-5_at 5.8 A 0.883887
AFFX-ThrX-M_at 4.4 A 0.834139

Total number of rows: 45101

Table truncated, full table size 1207 Kbytes.

Supplementary file Size Download File type/resource
GSM147509.CEL.gz 6.0 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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