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Sample GSM147511 Query DataSets for GSM147511
Status Public on Dec 02, 2006
Title Lmna H222P heterozygous male 5
Sample type RNA
Source name whole heart
Organism Mus musculus
Characteristics C57BL6
Extracted molecule total RNA
Extraction protocol RNA was extracted using Rneasy kit (QIAGEN)
Label biotin
Label protocol standard Affymetrix procedures
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description 10 weeks
Data processing GC-RMA
Submission date Nov 29, 2006
Last update date Aug 28, 2018
Contact name antoine Muchir
Phone 212 305 4088
Organization name columbia university
Department Medicine
Street address 630W 168th street
City New York
State/province NY
ZIP/Postal code 10032
Country USA
Platform ID GPL1261
Series (2)
GSE6397 Comparison between gene expression in heart from Lmna H222P heterozygous and control mice
GSE8000 Activation of MAPK pathways links LMNA mutations to cardiomyopathy in Emery-Dreifuss muscular dystrophy
Reanalyzed by GSE119085

Data table header descriptions
VALUE signal intensity
ABS_CALL absent or present
DETECTION P-VALUE p-value that indicates the significance level of the detection call

Data table
AFFX-BioB-5_at 379.9 P 0.000857
AFFX-BioB-M_at 693.6 P 0.000127
AFFX-BioB-3_at 285.2 P 0.00141
AFFX-BioC-5_at 1550.4 P 0.000081
AFFX-BioC-3_at 1114.3 P 0.000044
AFFX-BioDn-5_at 2237 P 0.000044
AFFX-BioDn-3_at 7244.4 P 0.000052
AFFX-CreX-5_at 18144.1 P 0.000044
AFFX-CreX-3_at 21439 P 0.000044
AFFX-DapX-5_at 30.6 P 0.042948
AFFX-DapX-M_at 7 A 0.772364
AFFX-DapX-3_at 6.3 A 0.617411
AFFX-LysX-5_at 25 A 0.559354
AFFX-LysX-M_at 33.1 A 0.52976
AFFX-LysX-3_at 4.5 A 0.455409
AFFX-PheX-5_at 4.7 A 0.749204
AFFX-PheX-M_at 4.2 A 0.868639
AFFX-PheX-3_at 27.3 A 0.354453
AFFX-ThrX-5_at 6.7 A 0.921998
AFFX-ThrX-M_at 2.7 A 0.916408

Total number of rows: 45101

Table truncated, full table size 1206 Kbytes.

Supplementary file Size Download File type/resource
GSM147511.CEL.gz 5.9 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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