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Sample GSM147512 Query DataSets for GSM147512
Status Public on Dec 02, 2006
Title Lmna H222P heterozygous male 6
Sample type RNA
Source name whole heart
Organism Mus musculus
Characteristics C57BL6
Extracted molecule total RNA
Extraction protocol RNA was extracted using Rneasy kit (QIAGEN)
Label biotin
Label protocol standard Affymetrix procedures
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description 10 weeks
Data processing GC-RMA
Submission date Nov 29, 2006
Last update date Aug 28, 2018
Contact name antoine Muchir
Phone 212 305 4088
Organization name columbia university
Department Medicine
Street address 630W 168th street
City New York
State/province NY
ZIP/Postal code 10032
Country USA
Platform ID GPL1261
Series (2)
GSE6397 Comparison between gene expression in heart from Lmna H222P heterozygous and control mice
GSE8000 Activation of MAPK pathways links LMNA mutations to cardiomyopathy in Emery-Dreifuss muscular dystrophy
Reanalyzed by GSE119085

Data table header descriptions
VALUE signal intensity
ABS_CALL absent or present
DETECTION P-VALUE p-value that indicates the significance level of the detection call

Data table
AFFX-BioB-5_at 80.9 P 0.030976
AFFX-BioB-M_at 149.4 P 0.01667
AFFX-BioB-3_at 73.7 M 0.054213
AFFX-BioC-5_at 337.5 P 0.00034
AFFX-BioC-3_at 266.6 P 0.000081
AFFX-BioDn-5_at 422.6 P 0.000044
AFFX-BioDn-3_at 1990.9 P 0.00039
AFFX-CreX-5_at 4409.1 P 0.000052
AFFX-CreX-3_at 5455 P 0.000052
AFFX-DapX-5_at 4.4 A 0.876428
AFFX-DapX-M_at 32 A 0.699394
AFFX-DapX-3_at 5.3 A 0.99238
AFFX-LysX-5_at 34.4 M 0.058444
AFFX-LysX-M_at 7 A 0.960339
AFFX-LysX-3_at 6 A 0.5
AFFX-PheX-5_at 4.6 A 0.904333
AFFX-PheX-M_at 5.4 A 0.953518
AFFX-PheX-3_at 6.4 A 0.804734
AFFX-ThrX-5_at 12.5 A 0.966323
AFFX-ThrX-M_at 22.2 A 0.834139

Total number of rows: 45101

Table truncated, full table size 1203 Kbytes.

Supplementary file Size Download File type/resource
GSM147512.CEL.gz 6.5 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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