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GEO accession:
Sample GSM147512
Query DataSets for GSM147512
Status
Public on Dec 02, 2006
Title
Lmna H222P heterozygous male 6
Sample type
RNA
Source name
whole heart
Organism
Mus musculus
Characteristics
C57BL6
Extracted molecule
total RNA
Extraction protocol
RNA was extracted using Rneasy kit (QIAGEN)
Label
biotin
Label protocol
standard Affymetrix procedures
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
10 weeks
Data processing
GC-RMA
Submission date
Nov 29, 2006
Last update date
Aug 28, 2018
Contact name
antoine Muchir
E-mail(s)
am2434@columbia.edu
Phone
212 305 4088
Organization name
columbia university
Department
Medicine
Street address
630W 168th street
City
New York
State/province
NY
ZIP/Postal code
10032
Country
USA
Platform ID
GPL1261
Series (2)
GSE6397
Comparison between gene expression in heart from Lmna H222P heterozygous and control mice
GSE8000
Activation of MAPK pathways links LMNA mutations to cardiomyopathy in Emery-Dreifuss muscular dystrophy
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
signal intensity
ABS_CALL
absent or present
DETECTION P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
80.9
P
0.030976
AFFX-BioB-M_at
149.4
P
0.01667
AFFX-BioB-3_at
73.7
M
0.054213
AFFX-BioC-5_at
337.5
P
0.00034
AFFX-BioC-3_at
266.6
P
0.000081
AFFX-BioDn-5_at
422.6
P
0.000044
AFFX-BioDn-3_at
1990.9
P
0.00039
AFFX-CreX-5_at
4409.1
P
0.000052
AFFX-CreX-3_at
5455
P
0.000052
AFFX-DapX-5_at
4.4
A
0.876428
AFFX-DapX-M_at
32
A
0.699394
AFFX-DapX-3_at
5.3
A
0.99238
AFFX-LysX-5_at
34.4
M
0.058444
AFFX-LysX-M_at
7
A
0.960339
AFFX-LysX-3_at
6
A
0.5
AFFX-PheX-5_at
4.6
A
0.904333
AFFX-PheX-M_at
5.4
A
0.953518
AFFX-PheX-3_at
6.4
A
0.804734
AFFX-ThrX-5_at
12.5
A
0.966323
AFFX-ThrX-M_at
22.2
A
0.834139
Total number of rows:
45101
Table truncated, full table size
1203 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM147512.CEL.gz
6.5 Mb
(ftp)
(http)
CEL
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