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GEO accession:
Sample GSM147514
Query DataSets for GSM147514
Status
Public on Dec 02, 2006
Title
Lmna H222P homozygous male 1
Sample type
RNA
Source name
whole heart
Organism
Mus musculus
Characteristics
C57BL6
Extracted molecule
total RNA
Extraction protocol
RNA was extracted using Rneasy kit (QIAGEN)
Label
biotin
Label protocol
standard Affymetrix procedures
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
10 weeks
Data processing
GC-RMA
Submission date
Nov 29, 2006
Last update date
Aug 28, 2018
Contact name
antoine Muchir
E-mail(s)
am2434@columbia.edu
Phone
212 305 4088
Organization name
columbia university
Department
Medicine
Street address
630W 168th street
City
New York
State/province
NY
ZIP/Postal code
10032
Country
USA
Platform ID
GPL1261
Series (2)
GSE6398
Comparison between gene expression in heart from Lmna H222P homozygous and control mice
GSE8000
Activation of MAPK pathways links LMNA mutations to cardiomyopathy in Emery-Dreifuss muscular dystrophy
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
signal intensity
ABS_CALL
absent or present
DETECTION P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
518.8
P
0.001102
AFFX-BioB-M_at
628.2
P
0.000662
AFFX-BioB-3_at
293.3
P
0.000857
AFFX-BioC-5_at
1535.4
P
0.000052
AFFX-BioC-3_at
1338.9
P
0.000052
AFFX-BioDn-5_at
2354.9
P
0.000044
AFFX-BioDn-3_at
7240
P
0.000044
AFFX-CreX-5_at
19788.8
P
0.000052
AFFX-CreX-3_at
20877.8
P
0.000044
AFFX-DapX-5_at
35.4
A
0.5
AFFX-DapX-M_at
11.4
A
0.824672
AFFX-DapX-3_at
10.1
A
0.966323
AFFX-LysX-5_at
40.3
A
0.58862
AFFX-LysX-M_at
32.5
A
0.686277
AFFX-LysX-3_at
64.1
A
0.165861
AFFX-PheX-5_at
36.1
A
0.794268
AFFX-PheX-M_at
13.8
A
0.843268
AFFX-PheX-3_at
71.6
A
0.262827
AFFX-ThrX-5_at
32.9
A
0.712257
AFFX-ThrX-M_at
6.9
A
0.963431
Total number of rows:
45101
Table truncated, full table size
1208 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM147514.CEL.gz
6.2 Mb
(ftp)
(http)
CEL
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