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GEO accession:
Sample GSM147515
Query DataSets for GSM147515
Status
Public on Dec 02, 2006
Title
Lmna H222P homozygous male 2
Sample type
RNA
Source name
whole heart
Organism
Mus musculus
Characteristics
C57BL6
Extracted molecule
total RNA
Extraction protocol
RNA was extracted using Rneasy kit (QIAGEN)
Label
biotin
Label protocol
standard Affymetrix procedures
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
10 weeks
Data processing
GC-RMA
Submission date
Nov 29, 2006
Last update date
Aug 28, 2018
Contact name
antoine Muchir
E-mail(s)
am2434@columbia.edu
Phone
212 305 4088
Organization name
columbia university
Department
Medicine
Street address
630W 168th street
City
New York
State/province
NY
ZIP/Postal code
10032
Country
USA
Platform ID
GPL1261
Series (2)
GSE6398
Comparison between gene expression in heart from Lmna H222P homozygous and control mice
GSE8000
Activation of MAPK pathways links LMNA mutations to cardiomyopathy in Emery-Dreifuss muscular dystrophy
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
signal intensity
ABS_CALL
absent or present
DETECTION P-VALUE
p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
344.1
P
0.00762
AFFX-BioB-M_at
470.7
P
0.000972
AFFX-BioB-3_at
266.7
P
0.002023
AFFX-BioC-5_at
1108.8
P
0.000081
AFFX-BioC-3_at
718.8
P
0.00011
AFFX-BioDn-5_at
1653
P
0.000044
AFFX-BioDn-3_at
6199.9
P
0.000052
AFFX-CreX-5_at
14121
P
0.000044
AFFX-CreX-3_at
16989.8
P
0.000044
AFFX-DapX-5_at
44.8
A
0.425962
AFFX-DapX-M_at
71.2
A
0.544587
AFFX-DapX-3_at
106.9
A
0.58862
AFFX-LysX-5_at
11.9
A
0.988616
AFFX-LysX-M_at
12
A
0.988616
AFFX-LysX-3_at
92.2
A
0.139482
AFFX-PheX-5_at
9.7
A
0.876428
AFFX-PheX-M_at
5.8
A
0.966323
AFFX-PheX-3_at
74.6
A
0.5
AFFX-ThrX-5_at
12.1
A
0.969024
AFFX-ThrX-M_at
53.9
A
0.699394
Total number of rows:
45101
Table truncated, full table size
1210 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM147515.CEL.gz
6.2 Mb
(ftp)
(http)
CEL
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