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Sample GSM149212 Query DataSets for GSM149212
Status Public on Sep 08, 2011
Title cortex_knockout_replicate 2 B Chip
Sample type RNA
 
Source name mouse P7 cortex
Organism Mus musculus
Characteristics BRCA1 conditional knockout or wildtype cortex
Extracted molecule total RNA
Extraction protocol TRIZOL
Label Standard Affymetrix Protocol
Label protocol Standard Affymetrix Protocol
 
Hybridization protocol Standard Affymetrix Protocol
Scan protocol Standard Affymetrix Protocol
Description Standard Affymetrix Protocol
Data processing Only intensity values called Present were considered and values were processed using default MAS 5.0 parameters.
 
Submission date Dec 07, 2006
Last update date Sep 08, 2011
Contact name Gerald M Pao
E-mail(s) pao@salk.edu
Phone (858)4534100 X1125
Fax (858) 5587454
URL http://www.salk.edu
Organization name Salk Institute
Department Laboratory of Genetics
Lab Verma
Street address 10010 North Torrey Pines
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platform ID GPL340
Series (1)
GSE6310 Brain BRCA1 conditional knockout

Data table header descriptions
ID_REF
SIGNAL_RAW Raw signal intensity
VALUE Signal of probes called present

Data table
ID_REF SIGNAL_RAW VALUE
AFFX-BioB-5_at 255.8 255.8
AFFX-BioB-M_at 346.6 346.6
AFFX-BioB-3_at 196.8 196.8
AFFX-BioC-5_at 1249.7 1249.7
AFFX-BioC-3_at 810 810
AFFX-BioDn-5_at 1401.1 1401.1
AFFX-BioDn-3_at 5148.8 5148.8
AFFX-CreX-5_at 8979.4 8979.4
AFFX-CreX-3_at 17157.2 17157.2
AFFX-DapX-5_at 641.9 641.9
AFFX-DapX-M_at 1213.4 1213.4
AFFX-DapX-3_at 1304.9 1304.9
AFFX-LysX-5_at 633 633
AFFX-LysX-M_at 690.3 690.3
AFFX-LysX-3_at 1386.7 1386.7
AFFX-PheX-5_at 1137.7 1137.7
AFFX-PheX-M_at 1067.5 1067.5
AFFX-PheX-3_at 1370.9 1370.9
AFFX-ThrX-5_at 743.6 743.6
AFFX-ThrX-M_at 1050.4 1050.4

Total number of rows: 22575

Table truncated, full table size 428 Kbytes.




Supplementary file Size Download File type/resource
GSM149212.CEL.gz 2.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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