NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM149213 Query DataSets for GSM149213
Status Public on Sep 08, 2011
Title cortex_knockout_replicate 3 B Chip
Sample type RNA
 
Source name mouse P7 cortex
Organism Mus musculus
Characteristics BRCA1 conditional knockout or wildtype cortex
Extracted molecule total RNA
Extraction protocol TRIZOL
Label Standard Affymetrix Protocol
Label protocol Standard Affymetrix Protocol
 
Hybridization protocol Standard Affymetrix Protocol
Scan protocol Standard Affymetrix Protocol
Description Standard Affymetrix Protocol
Data processing Only intensity values called Present were considered and values were processed using default MAS 5.0 parameters.
 
Submission date Dec 07, 2006
Last update date Sep 08, 2011
Contact name Gerald M Pao
E-mail(s) pao@salk.edu
Phone (858)4534100 X1125
Fax (858) 5587454
URL http://www.salk.edu
Organization name Salk Institute
Department Laboratory of Genetics
Lab Verma
Street address 10010 North Torrey Pines
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platform ID GPL340
Series (1)
GSE6310 Brain BRCA1 conditional knockout

Data table header descriptions
ID_REF
SIGNAL_RAW Raw signal intensity
VALUE Signal of probes called present

Data table
ID_REF SIGNAL_RAW VALUE
AFFX-BioB-5_at 365.5 365.5
AFFX-BioB-M_at 433.9 433.9
AFFX-BioB-3_at 181.3
AFFX-BioC-5_at 1198.1 1198.1
AFFX-BioC-3_at 782.6 782.6
AFFX-BioDn-5_at 1606.7 1606.7
AFFX-BioDn-3_at 5922.6 5922.6
AFFX-CreX-5_at 8070.8 8070.8
AFFX-CreX-3_at 13471.6 13471.6
AFFX-DapX-5_at 658 658
AFFX-DapX-M_at 1216.4 1216.4
AFFX-DapX-3_at 1297.1 1297.1
AFFX-LysX-5_at 594.6 594.6
AFFX-LysX-M_at 807.5 807.5
AFFX-LysX-3_at 1364.6 1364.6
AFFX-PheX-5_at 939 939
AFFX-PheX-M_at 894.9 894.9
AFFX-PheX-3_at 1435.2 1435.2
AFFX-ThrX-5_at 689.8 689.8
AFFX-ThrX-M_at 892.6 892.6

Total number of rows: 22575

Table truncated, full table size 421 Kbytes.




Supplementary file Size Download File type/resource
GSM149213.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap