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Sample GSM149217 Query DataSets for GSM149217
Status Public on Sep 08, 2011
Title rest_knockout_replicate 1
Sample type RNA
 
Source name mouse P7 brain
Organism Mus musculus
Characteristics BRCA1 conditional knockout or wildtype brain, minus the cortex
Extracted molecule total RNA
Extraction protocol TRIZOL
Label Standard Affymetrix Protocol
Label protocol Standard Affymetrix Protocol
 
Hybridization protocol Standard Affymetrix Protocol
Scan protocol Standard Affymetrix Protocol
Description Standard Affymetrix Protocol
Data processing Only intensity values called Present were considered and values were processed using default MAS 5.0 parameters.
 
Submission date Dec 07, 2006
Last update date Sep 08, 2011
Contact name Gerald M Pao
E-mail(s) pao@salk.edu
Phone (858)4534100 X1125
Fax (858) 5587454
URL http://www.salk.edu
Organization name Salk Institute
Department Laboratory of Genetics
Lab Verma
Street address 10010 North Torrey Pines
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platform ID GPL1261
Series (1)
GSE6310 Brain BRCA1 conditional knockout

Data table header descriptions
ID_REF
SIGNAL_RAW Raw signal intensity
VALUE Signal of probes called present

Data table
ID_REF SIGNAL_RAW VALUE
AFFX-BioB-5_at 109.1 109.1
AFFX-BioB-M_at 159.2 159.2
AFFX-BioB-3_at 137.6 137.6
AFFX-BioC-5_at 520.5 520.5
AFFX-BioC-3_at 362.4 362.4
AFFX-BioDn-5_at 800.9 800.9
AFFX-BioDn-3_at 2204.1 2204.1
AFFX-CreX-5_at 3963.3 3963.3
AFFX-CreX-3_at 4897.2 4897.2
AFFX-DapX-5_at 259.4 259.4
AFFX-DapX-M_at 619.8 619.8
AFFX-DapX-3_at 626.2 626.2
AFFX-LysX-5_at 277.3 277.3
AFFX-LysX-M_at 384.9 384.9
AFFX-LysX-3_at 510.9 510.9
AFFX-PheX-5_at 562 562
AFFX-PheX-M_at 504.2 504.2
AFFX-PheX-3_at 553.8 553.8
AFFX-ThrX-5_at 545.9 545.9
AFFX-ThrX-M_at 558.2 558.2

Total number of rows: 45101

Table truncated, full table size 874 Kbytes.




Supplementary file Size Download File type/resource
GSM149217.CEL.gz 3.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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