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Status
Public on Jan 17, 2004
Title
IM-4_PRE
Sample type
RNA
Source name
Left Cardiac Ventricle
Organism
Homo sapiens Extracted molecule
total RNA
Description
19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip.
Submission date
Jan 07, 2004
Last update date
Oct 28, 2005
Contact name
Grindle M Suzanne
E-mail(s)
grind001@umn.edu Phone
612-624-2143
Organization name
Lillehei Heart Institute
Department
Division of Cardiology
Lab
Hall Cardiology
Street address
Dwan CVRC 289, MMC 508, 420 Delaware Street SE
City
Minneapolis
State/province
MN
ZIP/Postal code
55455
Country
USA
Platform ID
GPL96 Series (1)
GSE974 Left ventricular apex samples
Data table header descriptions ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
89.3
P
0.001593
AFFX-BioB-M_at
187.3
P
0.000127
AFFX-BioB-3_at
76.8
P
0.003212
AFFX-BioC-5_at
243.2
P
0.00011
AFFX-BioC-3_at
206.2
P
0.00006
AFFX-BioDn-5_at
217.7
P
0.00006
AFFX-BioDn-3_at
1577.9
P
0.00007
AFFX-CreX-5_at
1619.4
P
0.000044
AFFX-CreX-3_at
2341.5
P
0.000044
AFFX-DapX-5_at
7.9
A
0.078002
AFFX-DapX-M_at
5.5
A
0.368438
AFFX-DapX-3_at
5.1
A
0.559354
AFFX-LysX-5_at
3.3
A
0.39692
AFFX-LysX-M_at
8.6
A
0.574038
AFFX-LysX-3_at
0.5
A
0.712257
AFFX-PheX-5_at
0.7
A
0.916408
AFFX-PheX-M_at
1.9
A
0.772364
AFFX-PheX-3_at
4
A
0.749204
AFFX-ThrX-5_at
2
A
0.772364
AFFX-ThrX-M_at
2.6
A
0.686277
22283 580 Kbytes .Supplementary file Size Download File type/resource GSM14950.CEL.gz
3.3 Mb
(ftp) (http) CEL
Processed data included within Sample table
