GEO help: Mouse over screen elements for information.
Status
Public on Jan 17, 2004
Title
IM-6_POST
Sample type
RNA
Source name
Left Cardiac Ventricle
Organism
Homo sapiens Extracted molecule
total RNA
Description
19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip.
Submission date
Jan 07, 2004
Last update date
Oct 28, 2005
Contact name
Grindle M Suzanne
E-mail(s)
grind001@umn.edu Phone
612-624-2143
Organization name
Lillehei Heart Institute
Department
Division of Cardiology
Lab
Hall Cardiology
Street address
Dwan CVRC 289, MMC 508, 420 Delaware Street SE
City
Minneapolis
State/province
MN
ZIP/Postal code
55455
Country
USA
Platform ID
GPL96 Series (1)
GSE974 Left ventricular apex samples
Data table header descriptions ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
90.2
P
0.00844
AFFX-BioB-M_at
134.1
P
0.002867
AFFX-BioB-3_at
53.8
M
0.050229
AFFX-BioC-5_at
204.1
P
0.000446
AFFX-BioC-3_at
119.3
P
0.000581
AFFX-BioDn-5_at
136.8
P
0.000972
AFFX-BioDn-3_at
1421.4
P
0.000195
AFFX-CreX-5_at
1067.5
P
0.000044
AFFX-CreX-3_at
1856.6
P
0.000044
AFFX-DapX-5_at
9.2
A
0.239063
AFFX-DapX-M_at
17.5
A
0.250796
AFFX-DapX-3_at
1.8
A
0.98333
AFFX-LysX-5_at
8.1
A
0.195266
AFFX-LysX-M_at
11.9
A
0.60308
AFFX-LysX-3_at
5.9
A
0.354453
AFFX-PheX-5_at
1.9
A
0.814869
AFFX-PheX-M_at
1.4
A
0.910522
AFFX-PheX-3_at
7.1
A
0.645547
AFFX-ThrX-5_at
2.9
A
0.737173
AFFX-ThrX-M_at
13.1
A
0.5
22283 582 Kbytes .Supplementary file Size Download File type/resource GSM14953.CEL.gz
3.4 Mb
(ftp) (http) CEL
Processed data included within Sample table
