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Status
Public on Jan 17, 2004
Title
N-9_PRE
Sample type
RNA
Source name
Left Cardiac Ventricle
Organism
Homo sapiens
Extracted molecule
total RNA
Description
19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip. Keywords = Heart, Cardiac, Assist Device, LVAD, GATA-4, Sprouty1, microarray, heart failure
Submission date
Jan 07, 2004
Last update date
Oct 28, 2005
Contact name
Grindle M Suzanne
E-mail(s)
grind001@umn.edu
Phone
612-624-2143
Organization name
Lillehei Heart Institute
Department
Division of Cardiology
Lab
Hall Cardiology
Street address
Dwan CVRC 289, MMC 508, 420 Delaware Street SE
City
Minneapolis
State/province
MN
ZIP/Postal code
55455
Country
USA
Platform ID
GPL96
Series (1)
GSE974
Left ventricular apex samples
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
100.1
M
0.058444
AFFX-BioB-M_at
99.1
P
0.011384
AFFX-BioB-3_at
21.2
A
0.39692
AFFX-BioC-5_at
206.4
P
0.000581
AFFX-BioC-3_at
88.9
P
0.001593
AFFX-BioDn-5_at
150.1
P
0.006187
AFFX-BioDn-3_at
1373.6
P
0.000662
AFFX-CreX-5_at
897.5
P
0.000044
AFFX-CreX-3_at
1581.8
P
0.000044
AFFX-DapX-5_at
7
A
0.470241
AFFX-DapX-M_at
20.5
A
0.300606
AFFX-DapX-3_at
4.7
A
0.910522
AFFX-LysX-5_at
3.3
A
0.39692
AFFX-LysX-M_at
29.2
A
0.300606
AFFX-LysX-3_at
2.3
A
0.51489
AFFX-PheX-5_at
3.5
A
0.772364
AFFX-PheX-M_at
4.4
A
0.852061
AFFX-PheX-3_at
10.5
A
0.737173
AFFX-ThrX-5_at
4.8
A
0.659339
AFFX-ThrX-M_at
3.7
A
0.686277
Total number of rows: 22283 Table truncated, full table size 584 Kbytes .Supplementary file
Size
Download
File type/resource
GSM14973.CEL.gz
3.5 Mb
(ftp) (http)
CEL
Processed data included within Sample table