NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM149821 Query DataSets for GSM149821
Status Public on Jan 01, 2007
Title B6D2 1CELL FERTILIZED EMBRYO SAMPLE4
Sample type RNA
 
Source name 1CELL EMBRYO CULTURED IN KSOM
Organism Mus musculus
Characteristics B6D2 FEMALE MICE
Extracted molecule polyA RNA
Extraction protocol PICOPURE RNA EXTRACTION KIT, ARCTURUS. PROTOCOL ACCORDING TO MANUFACTURER SPECIFICATION
Label BIOTIN
Label protocol ENZO RNA LABELLING KIT. PROTOCOL ACCORDING TO MANUFACTURER SPECIFICATION
 
Hybridization protocol EukGE-WS2v5_450 script for Affymetrix Fluidics Station
Scan protocol default Affymetrix GCOS settings for GeneChip 3000 7G scanner
Description na
Data processing Microarray Analysis Suite 5.0 (MAS, Affymetrix) was used to quantify microarray signals with default analysis parameters and global scaling to target MEAN = 150
 
Submission date Dec 12, 2006
Last update date Aug 28, 2018
Contact name Keith E Latham
URL http://www.temple.edu/lathamlab
Organization name Temple University School of Medicine
Department The Fels Institute for Cancer Research and Molecular Biology
Street address 3307 N Broad St
City Philadelphia
State/province PA
ZIP/Postal code 19140
Country USA
 
Platform ID GPL1261
Series (1)
GSE6595 Gene expression study in 1 and 2 cell cloned mice embryos
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Microarray Analysis Suite 5.0 (MAS, Affymetrix) was used to quantify microarray signals with default analysis parameters and global scaling to target MEAN = 150

Data table
ID_REF VALUE
AFFX-BioB-5_at 108.9
AFFX-BioB-M_at 191
AFFX-BioB-3_at 117.3
AFFX-BioC-5_at 373.7
AFFX-BioC-3_at 489.1
AFFX-BioDn-5_at 767.4
AFFX-BioDn-3_at 1406.6
AFFX-CreX-5_at 4450.3
AFFX-CreX-3_at 6082.5
AFFX-DapX-5_at 25.8
AFFX-DapX-M_at 229
AFFX-DapX-3_at 493.1
AFFX-LysX-5_at 11.7
AFFX-LysX-M_at 42.9
AFFX-LysX-3_at 86
AFFX-PheX-5_at 9
AFFX-PheX-M_at 36.2
AFFX-PheX-3_at 81.7
AFFX-ThrX-5_at 1.5
AFFX-ThrX-M_at 38.1

Total number of rows: 45101

Table truncated, full table size 716 Kbytes.




Supplementary file Size Download File type/resource
GSM149821.CEL.gz 3.6 Mb (ftp)(http) CEL
Raw data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap