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Sample GSM149823 Query DataSets for GSM149823
Status Public on Jan 01, 2007
Title B6D2 1CELL SCNT EMBRYOS SAMPLE A1
Sample type RNA
 
Source name 1CELL SCNT EMBRYOS. DONOR CELL:CUMULUS CELL
Organism Mus musculus
Characteristics B6D2 FEMALE. DONOR CELL: CUMULUS CELL. CULTURED IN MEMa+AMANITIN
Extracted molecule polyA RNA
Extraction protocol PICOPURE RNA EXTRACTION KIT, ARCTURUS. PROTOCOL ACCORDING TO MANUFACTURER SPECIFICATION
Label BIOTIN
Label protocol ENZO RNA LABELLING KIT. PROTOCOL ACCORDING TO MANUFACTURER SPECIFICATION
 
Hybridization protocol EukGE-WS2v5_450 script for Affymetrix Fluidics Station
Scan protocol default Affymetrix GCOS settings for GeneChip 3000 7G scanner
Description na
Data processing Microarray Analysis Suite 5.0 (MAS, Affymetrix) was used to quantify microarray signals with default analysis parameters and global scaling to target MEAN = 150
 
Submission date Dec 12, 2006
Last update date Aug 28, 2018
Contact name Keith E Latham
URL http://www.temple.edu/lathamlab
Organization name Temple University School of Medicine
Department The Fels Institute for Cancer Research and Molecular Biology
Street address 3307 N Broad St
City Philadelphia
State/province PA
ZIP/Postal code 19140
Country USA
 
Platform ID GPL1261
Series (1)
GSE6595 Gene expression study in 1 and 2 cell cloned mice embryos
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Microarray Analysis Suite 5.0 (MAS, Affymetrix) was used to quantify microarray signals with default analysis parameters and global scaling to target MEAN = 150

Data table
ID_REF VALUE
AFFX-BioB-5_at 200
AFFX-BioB-M_at 352.9
AFFX-BioB-3_at 199.2
AFFX-BioC-5_at 684.6
AFFX-BioC-3_at 742.5
AFFX-BioDn-5_at 1355.3
AFFX-BioDn-3_at 1926.1
AFFX-CreX-5_at 7880.6
AFFX-CreX-3_at 9814
AFFX-DapX-5_at 1.2
AFFX-DapX-M_at 2.1
AFFX-DapX-3_at 15.6
AFFX-LysX-5_at 4.1
AFFX-LysX-M_at 21.2
AFFX-LysX-3_at 1.9
AFFX-PheX-5_at 1.2
AFFX-PheX-M_at 1.5
AFFX-PheX-3_at 23.2
AFFX-ThrX-5_at 14.1
AFFX-ThrX-M_at 8.8

Total number of rows: 45101

Table truncated, full table size 716 Kbytes.




Supplementary file Size Download File type/resource
GSM149823.CEL.gz 3.4 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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