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Sample GSM149891 Query DataSets for GSM149891
Status Public on Jan 01, 2007
Title B6D2 1CELL SCNT EMBRYOS SAMPLE A4
Sample type RNA
 
Source name B6D2 1CELL SCNT EMBRYOS
Organism Mus musculus
Characteristics B6D2 FEMALE. DONOR CELL:CUMULUS CELL. EMBRYOS CULTURED IN MEMa+AMANITIN
Extracted molecule polyA RNA
Extraction protocol PICOPURE RNA EXTRACTION KIT. PROTOCOL ACCORDING TO MANUFACTURER SPECIFICATION
Label BIOTIN
Label protocol ENZO BIOTIN LABELLING KIT. PROTOCOL ACCORDING TO MAUFACTURER SPECIFICATION
 
Hybridization protocol EukGE-WS2v5_450 script for Affymetrix Fluidics Station
Scan protocol default Affymetrix GCOS settings for GeneChip 3000 7G scanner
Description na
Data processing Microarray Analysis Suite 5.0 (MAS, Affymetrix) was used to quantify microarray signals with default analysis parameters and global scaling to target MEAN = 150
 
Submission date Dec 13, 2006
Last update date Aug 28, 2018
Contact name Keith E Latham
URL http://www.temple.edu/lathamlab
Organization name Temple University School of Medicine
Department The Fels Institute for Cancer Research and Molecular Biology
Street address 3307 N Broad St
City Philadelphia
State/province PA
ZIP/Postal code 19140
Country USA
 
Platform ID GPL1261
Series (1)
GSE6595 Gene expression study in 1 and 2 cell cloned mice embryos
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Microarray Analysis Suite 5.0 (MAS, Affymetrix) was used to quantify microarray signals with default analysis parameters and global scaling to target MEAN = 150

Data table
ID_REF VALUE
AFFX-BioB-5_at 118
AFFX-BioB-M_at 194.3
AFFX-BioB-3_at 125.5
AFFX-BioC-5_at 445.1
AFFX-BioC-3_at 515.6
AFFX-BioDn-5_at 827.8
AFFX-BioDn-3_at 1537
AFFX-CreX-5_at 5091.9
AFFX-CreX-3_at 6737.7
AFFX-DapX-5_at 20.1
AFFX-DapX-M_at 1.4
AFFX-DapX-3_at 16.3
AFFX-LysX-5_at 1
AFFX-LysX-M_at 3.5
AFFX-LysX-3_at 0.9
AFFX-PheX-5_at 0.7
AFFX-PheX-M_at 1.3
AFFX-PheX-3_at 18.1
AFFX-ThrX-5_at 1.7
AFFX-ThrX-M_at 11.8

Total number of rows: 45101

Table truncated, full table size 717 Kbytes.




Supplementary file Size Download File type/resource
GSM149891.CEL.gz 3.5 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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