|
| Status |
Public on Mar 25, 2015 |
| Title |
BM_MSCs-RAEB-rep1 |
| Sample type |
RNA |
| |
|
| Source name |
Bone marrow mesenchymal stromal cells (BM MSCs), RAEB
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: bone marrow mesenchymal stromal cells
diagnosis: MDS (RAEB-1)
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was extracted with Trizol and purified with Qiagen RNeasy columns according to the manufacturers' protocols. Quality control was performed with Agilent 2100 Bioanalyzer.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion Illumina RNA amplification kit
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
Bone marrow mesenchymal stromal cells (BM MSCs) from RAEB group
|
| Data processing |
The data were normalised using quantile normalisation with lumi R package
|
| |
|
| Submission date |
Sep 29, 2014 |
| Last update date |
Mar 25, 2015 |
| Contact name |
Seungwoo Hwang |
| E-mail(s) |
swhwang10@yahoo.com
|
| Phone |
82-42-879-8544
|
| Organization name |
Korea Research Institute of Bioscience and Biotechnology
|
| Department |
Korean Bioinformation Center
|
| Street address |
52 Eoeun-dong Yuseong-gu
|
| City |
Daejeon |
| ZIP/Postal code |
305-806 |
| Country |
South Korea |
| |
|
| Platform ID |
GPL10558 |
| Series (1) |
| GSE61853 |
Gene expression analysis of bone marrow mesenchymal stromal cells from myelodysplastic syndrome (MDS) patients and normal controls |
|
