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Sample GSM15394

Query DataSets for GSM15394

Status

Public on Jan 30, 2004

Title

APL2

Sample type

RNA

Source name

primary APL cells

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample from a leukopharesis of a patient with acute promyelocytic leukemia (APL) with a t(15;17) and a white blood cell count of 185,000 with 97% myeloblasts at diagnosis. Target preparation and hybridization as described in Stegmaier et al., Nature Genetics 2004.
Keywords = APL Leukemia

Submission date

Jan 16, 2004

Last update date

May 28, 2005

Contact name

Ken Ross

E-mail(s)

kross@broadinstitute.org

Phone

617-714-7473

Fax

617-714-8955

URL

http://www.broad.mit.edu/cancer/

Organization name

Broad Institute

Department

Cancer Genomics

Lab

Golub Lab

Street address

7 Cambridge Center

City

Cambridge

State/province

ZIP/Postal code

02142

Country

USA

Platform ID

GPL96

Series (2)

GSE976	Gene Expression-Based High Throughput Screening: APL Treatment with Candidate Compounds
GSE995	Differentiation of acute myeloid leukemia cells

Data table header descriptions
ID_REF
VALUE	Affymetrix GeneChip MAS5 Signal
ABS_CALL	Affymetrix GeneChip MAS5 A, M, or P Call

Data table
ID_REF	VALUE	ABS_CALL
AFFX-BioB-5_at	2.0	A
AFFX-BioB-M_at	1.9	A
AFFX-BioB-3_at	1.3	A
AFFX-BioC-5_at	13.1	A
AFFX-BioC-3_at	4.3	A
AFFX-BioDn-5_at	1.4	A
AFFX-BioDn-3_at	46.0	A
AFFX-CreX-5_at	1.5	A
AFFX-CreX-3_at	20.5	A
AFFX-DapX-5_at	1.5	A
AFFX-DapX-M_at	24.2	A
AFFX-DapX-3_at	2.1	A
AFFX-LysX-5_at	7.8	A
AFFX-LysX-M_at	21.6	A
AFFX-LysX-3_at	4.1	A
AFFX-PheX-5_at	1.9	A
AFFX-PheX-M_at	3.0	A
AFFX-PheX-3_at	15.1	A
AFFX-ThrX-5_at	3.5	A
AFFX-ThrX-M_at	4.4	A

Total number of rows: 22283

Table truncated, full table size 389 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM15394.CEL.gz	3.4 Mb	(ftp)(http)	CEL
Processed data included within Sample table