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Sample GSM153970 Query DataSets for GSM153970
Status Public on Mar 24, 2008
Title 3T3L1_adipocyte_TetOff_2
Sample type RNA
 
Source name RNA was collected from 3T3L1 adipocytes expression only Tet-off plasmid.
Organism Mus musculus
Characteristics 3T3L1 adipocytes with control plasmid.
3T3L1 adipocytes expressing Uncoupling protein 1 (UCP1).
Biomaterial provider Jayaraman Laboratory
Growth protocol 3T3-L1 preadipocytes were grown until confluence and differentiated into adipocytes using a standard adipogenic cocktail.
Extracted molecule total RNA
Extraction protocol Adipocytes (10 days after differentiation) were used for extracting total RNA using the Nucleospin II RNA isolation kit (Clontech).
Label biotin
Label protocol Codelink Expression assay protocol.
 
Hybridization protocol Codelink Expression assay protocol.
Scan protocol Codelink Expression assay protocol.
Description RNA quality was assessed using the Agilent 2100 Bioanalyzer.
Data processing CodeLink Expression Analysis 4.1.0.29054
 
Submission date Jan 04, 2007
Last update date Mar 24, 2008
Contact name Arul Jayaraman
Organization name Texas A&M University
Department Artie McFerrin Department of Chemical Engineering
Street address 3122 TAMU
City College Station
State/province TX
ZIP/Postal code 77843-3122
Country USA
 
Platform ID GPL2897
Series (1)
GSE6643 Effect of forced uncoupling protein-1 expression on 3T3-L1 adipocyte gene expression

Data table header descriptions
ID_REF
SIGNAL_RAW Raw signal intensities corrected for background
VALUE Intensity normalized by median of spot-based raw intensity

Data table
ID_REF SIGNAL_RAW VALUE
1001 6544.8247 169.0005
1002 696.3177 17.9803
1003 13.8378 0.3573
1004 25.1613 0.6497
1005 19.0351 0.4915
1006 36.7826 0.9498
1007 6390.9268 165.0265
1008 6952.793 179.535
1010 137.8936 3.5607
1012 38.0606 0.9828
1013 46.04 1.1888
1014 6660.3911 171.9846
1015 6585.3042 170.0457
1017 14.7586 0.3811
1018 17.1556 0.443
1019 72.9556 1.8839
1020 10.3125 0.2663
1021 6728.5278 173.7441
1022 6929.5093 178.9338
1024 22.6061 0.5837

Total number of rows: 36227

Table truncated, full table size 771 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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