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Status
Public on Jan 30, 2004
Title
APL_Phen1
Sample type
RNA
Source name
primary APL cells treated with 1,10-phenanthroline
Organism
Homo sapiens Extracted molecule
total RNA
Description
Sample from a leukopharesis of a patient with acute promyelocytic leukemia (APL) with a t(15;17) and a white blood cell count of 185,000 with 97% myeloblasts at diagnosis treated with 1 uM 1,10-phenanthroline for 5 days. Target preparation and hybridization as described in Stegmaier et al., Nature Genetics 2004.
Submission date
Jan 16, 2004
Last update date
May 28, 2005
Contact name
Ken Ross
E-mail(s)
kross@broadinstitute.org Phone
617-714-7473
Fax
617-714-8955
URL
http://www.broad.mit.edu/cancer/ Organization name
Broad Institute
Department
Cancer Genomics
Lab
Golub Lab
Street address
7 Cambridge Center
City
Cambridge
State/province
MA
ZIP/Postal code
02142
Country
USA
Platform ID
GPL96 Series (2)
GSE976 Gene Expression-Based High Throughput Screening: APL Treatment with Candidate Compounds
GSE995 Differentiation of acute myeloid leukemia cells
Data table header descriptions ID_REF
VALUE Affymetrix GeneChip MAS5 Signal
ABS_CALL Affymetrix GeneChip MAS5 A,M, or P Call
Data table ID_REF VALUE ABS_CALL AFFX-BioB-5_at
4.1
A
AFFX-BioB-M_at
2.1
A
AFFX-BioB-3_at
2.9
A
AFFX-BioC-5_at
4.1
A
AFFX-BioC-3_at
2.1
A
AFFX-BioDn-5_at
1.1
A
AFFX-BioDn-3_at
82.0
A
AFFX-CreX-5_at
0.6
A
AFFX-CreX-3_at
4.6
A
AFFX-DapX-5_at
9.5
A
AFFX-DapX-M_at
13.6
A
AFFX-DapX-3_at
2.2
A
AFFX-LysX-5_at
1.3
A
AFFX-LysX-M_at
4.3
A
AFFX-LysX-3_at
11.2
A
AFFX-PheX-5_at
1.1
A
AFFX-PheX-M_at
3.7
A
AFFX-PheX-3_at
4.4
A
AFFX-ThrX-5_at
9.3
A
AFFX-ThrX-M_at
3.2
A
22283 384 Kbytes .Supplementary file Size Download File type/resource GSM15415.CEL.gz
3.3 Mb
(ftp) (http) CEL
Processed data included within Sample table
