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Sample GSM154246 Query DataSets for GSM154246
Status Public on Dec 01, 2007
Title AM14 B cells, Media alone, rep3
Sample type RNA
 
Source name Murine AM-14 B cells
Organism Mus musculus
Characteristics Splenic B cells from MRL/+ AM14 mice
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Standard Qiagen RNeasy mini kit protocol (www.qiagen.com)
Label Biotin
Label protocol Standard Ambion aRNA Message Amp protocols (www.ambion.com)
 
Hybridization protocol Standard Affymetrix protocol (www.affymetrix.com)
Scan protocol Standard Affymetrix protocol (www.affymetrix.com)
Description AM14 B cells, media alone
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings in Genedata Expressionist and global scaling with mask correction as normalization method. The mean target intensity of each array was arbitrarily set to 1500.
 
Submission date Jan 08, 2007
Last update date Aug 28, 2018
Contact name Jason W Bauer
E-mail(s) baue0271@umn.edu
Phone 612-625-5168
Organization name University of Minnesota
Street address 420 Deleware St SE MMC108
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
 
Platform ID GPL1261
Series (1)
GSE6674 Gene expression program of AM-14 B cells stimulated through the B cell receptor (BCR) and/or Toll-like receptors (TLR)
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF Affymetrix Probe Set ID
VALUE scaled Affymetrix intensity units

Data table
ID_REF VALUE
1415670_at 4039.34
1415671_at 14227
1415672_at 14133.65
1415673_at 3921.14
1415674_a_at 7035.85
1415675_at 4316.27
1415676_a_at 16010.88
1415677_at 4077.53
1415678_at 6642.92
1415679_at 25625.21
1415680_at 4510.97
1415681_at 7819.43
1415682_at 11936.86
1415683_at 17892.78
1415684_at 2023.65
1415685_at 1056.49
1415686_at 2925.28
1415687_a_at 32396.82
1415688_at 8602.59
1415689_s_at 3391.41

Total number of rows: 45101

Table truncated, full table size 810 Kbytes.




Supplementary file Size Download File type/resource
GSM154246.CEL.gz 6.1 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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