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Sample GSM154248 Query DataSets for GSM154248
Status Public on Dec 01, 2007
Title AM14 B cells, anti IgM treated, rep2
Sample type RNA
 
Source name Murine AM-14 B cells
Organism Mus musculus
Characteristics Splenic B cells from MRL/+ AM14 mice
Treatment protocol F(ab?)2 goat anti-mouse IgM (Jackson ImmunoResearch Laboratories)
Extracted molecule total RNA
Extraction protocol Standard Qiagen RNeasy mini kit protocol (www.qiagen.com)
Label Biotin
Label protocol Standard EnzoBio protocols (www.enzo.com)
 
Hybridization protocol Standard Affymetrix protocol (www.affymetrix.com)
Scan protocol Standard Affymetrix protocol (www.affymetrix.com)
Description AM14 B cells treated with anti-IgM
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings in Genedata Expressionist and global scaling with mask correction as normalization method. The mean target intensity of each array was arbitrarily set to 1500.
 
Submission date Jan 08, 2007
Last update date Aug 28, 2018
Contact name Jason W Bauer
E-mail(s) baue0271@umn.edu
Phone 612-625-5168
Organization name University of Minnesota
Street address 420 Deleware St SE MMC108
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
 
Platform ID GPL1261
Series (1)
GSE6674 Gene expression program of AM-14 B cells stimulated through the B cell receptor (BCR) and/or Toll-like receptors (TLR)
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF Affymetrix Probe Set ID
VALUE scaled Affymetrix intensity units

Data table
ID_REF VALUE
1415670_at 5152.85
1415671_at 13174.2
1415672_at 14670.76
1415673_at 3335.27
1415674_a_at 7105.64
1415675_at 4270.99
1415676_a_at 23604.33
1415677_at 1629.57
1415678_at 3455.53
1415679_at 19881.23
1415680_at 5627.25
1415681_at 6477.42
1415682_at 4319.45
1415683_at 16753.38
1415684_at 1637.11
1415685_at 1285.81
1415686_at 4781.27
1415687_a_at 25869.33
1415688_at 11543.82
1415689_s_at 1965.8

Total number of rows: 45101

Table truncated, full table size 812 Kbytes.




Supplementary file Size Download File type/resource
GSM154248.CEL.gz 6.2 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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