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Sample GSM154249 Query DataSets for GSM154249
Status Public on Dec 01, 2007
Title AM14 B cells, anti IgM treated, rep3
Sample type RNA
 
Source name Murine AM-14 B cells
Organism Mus musculus
Characteristics Splenic B cells from MRL/+ AM14 mice
Treatment protocol F(ab?)2 goat anti-mouse IgM (Jackson ImmunoResearch Laboratories)
Extracted molecule total RNA
Extraction protocol Standard Qiagen RNeasy mini kit protocol (www.qiagen.com)
Label Biotin
Label protocol Standard Ambion aRNA Message Amp protocols (www.ambion.com)
 
Hybridization protocol Standard Affymetrix protocol (www.affymetrix.com)
Scan protocol Standard Affymetrix protocol (www.affymetrix.com)
Description AM14 B cells treated with anti-IgM
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings in Genedata Expressionist and global scaling with mask correction as normalization method. The mean target intensity of each array was arbitrarily set to 1500.
 
Submission date Jan 08, 2007
Last update date Aug 28, 2018
Contact name Jason W Bauer
E-mail(s) baue0271@umn.edu
Phone 612-625-5168
Organization name University of Minnesota
Street address 420 Deleware St SE MMC108
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
 
Platform ID GPL1261
Series (1)
GSE6674 Gene expression program of AM-14 B cells stimulated through the B cell receptor (BCR) and/or Toll-like receptors (TLR)
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF Affymetrix Probe Set ID
VALUE scaled Affymetrix intensity units

Data table
ID_REF VALUE
1415670_at 5596.58
1415671_at 15227.69
1415672_at 14646.31
1415673_at 6277.39
1415674_a_at 9848.51
1415675_at 7322.98
1415676_a_at 27792.91
1415677_at 1279.49
1415678_at 10239.91
1415679_at 25454.2
1415680_at 6135.04
1415681_at 11373.53
1415682_at 3515.43
1415683_at 21751.07
1415684_at 2478.7
1415685_at 1187.77
1415686_at 4589.37
1415687_a_at 27737.62
1415688_at 11633.36
1415689_s_at 2730.31

Total number of rows: 45101

Table truncated, full table size 806 Kbytes.




Supplementary file Size Download File type/resource
GSM154249.CEL.gz 5.9 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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