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Sample GSM154250 Query DataSets for GSM154250
Status Public on Dec 01, 2007
Title AM14 B cells, CpG treated, rep1
Sample type RNA
Source name Murine AM-14 B cells
Organism Mus musculus
Characteristics Splenic B cells from MRL/+ AM14 mice
Treatment protocol CpG phosphorothioate oligo-deoxynucleotide 1826
Extracted molecule total RNA
Extraction protocol Standard Qiagen RNeasy mini kit protocol (
Label Biotin
Label protocol Standard EnzoBio protocols (
Hybridization protocol Standard Affymetrix protocol (
Scan protocol Standard Affymetrix protocol (
Description AM14 B cells, CpG treated
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings in Genedata Expressionist and global scaling with mask correction as normalization method. The mean target intensity of each array was arbitrarily set to 1500.
Submission date Jan 08, 2007
Last update date Aug 28, 2018
Contact name Jason W Bauer
Phone 612-625-5168
Organization name University of Minnesota
Street address 420 Deleware St SE MMC108
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
Platform ID GPL1261
Series (1)
GSE6674 Gene expression program of AM-14 B cells stimulated through the B cell receptor (BCR) and/or Toll-like receptors (TLR)
Reanalyzed by GSE119085

Data table header descriptions
ID_REF Affymetrix Probe Set ID
VALUE scaled Affymetrix intensity units

Data table
1415670_at 6781.63
1415671_at 4923.21
1415672_at 14122.62
1415673_at 3449.82
1415674_a_at 8368.56
1415675_at 4956.16
1415676_a_at 26943.26
1415677_at 764.47
1415678_at 5881.55
1415679_at 17822.05
1415680_at 7380.19
1415681_at 7727.23
1415682_at 4006.61
1415683_at 25524.24
1415684_at 2108.57
1415685_at 1374.53
1415686_at 3809.84
1415687_a_at 12621.26
1415688_at 12716.72
1415689_s_at 1709.1

Total number of rows: 45101

Table truncated, full table size 810 Kbytes.

Supplementary file Size Download File type/resource
GSM154250.CEL.gz 6.0 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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