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Sample GSM154252 Query DataSets for GSM154252
Status Public on Dec 01, 2007
Title AM14 B cells, CpG treated, rep3
Sample type RNA
 
Source name Murine AM-14 B cells
Organism Mus musculus
Characteristics Splenic B cells from MRL/+ AM14 mice
Treatment protocol CpG phosphorothioate oligo-deoxynucleotide 1826
Extracted molecule total RNA
Extraction protocol Standard Qiagen RNeasy mini kit protocol (www.qiagen.com)
Label Biotin
Label protocol Standard Ambion aRNA Message Amp protocols (www.ambion.com)
 
Hybridization protocol Standard Affymetrix protocol (www.affymetrix.com)
Scan protocol Standard Affymetrix protocol (www.affymetrix.com)
Description AM14 B cells, CpG treated
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings in Genedata Expressionist and global scaling with mask correction as normalization method. The mean target intensity of each array was arbitrarily set to 1500.
 
Submission date Jan 08, 2007
Last update date Aug 28, 2018
Contact name Jason W Bauer
E-mail(s) baue0271@umn.edu
Phone 612-625-5168
Organization name University of Minnesota
Street address 420 Deleware St SE MMC108
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
 
Platform ID GPL1261
Series (1)
GSE6674 Gene expression program of AM-14 B cells stimulated through the B cell receptor (BCR) and/or Toll-like receptors (TLR)
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF Affymetrix Probe Set ID
VALUE scaled Affymetrix intensity units

Data table
ID_REF VALUE
1415670_at 7307.43
1415671_at 6717.25
1415672_at 15200.85
1415673_at 6515.58
1415674_a_at 11603.96
1415675_at 6103.75
1415676_a_at 29809.25
1415677_at 584.72
1415678_at 8766.04
1415679_at 21777.64
1415680_at 6219.17
1415681_at 10203.06
1415682_at 4115.79
1415683_at 24257.71
1415684_at 2581.16
1415685_at 1181.59
1415686_at 3947.5
1415687_a_at 13819.74
1415688_at 11542.85
1415689_s_at 2382.88

Total number of rows: 45101

Table truncated, full table size 805 Kbytes.




Supplementary file Size Download File type/resource
GSM154252.CEL.gz 6.0 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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