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Sample GSM154254 Query DataSets for GSM154254
Status Public on Dec 01, 2007
Title AM14 B cells, PL2-3, rep2
Sample type RNA
 
Source name Murine AM-14 B cells
Organism Mus musculus
Characteristics Splenic B cells from MRL/+ AM14 mice
Treatment protocol PL2-3 (Chromatin IC)
Extracted molecule total RNA
Extraction protocol Standard Qiagen RNeasy mini kit protocol (www.qiagen.com)
Label Biotin
Label protocol Standard EnzoBio protocols (www.enzo.com)
 
Hybridization protocol Standard Affymetrix protocol (www.affymetrix.com)
Scan protocol Standard Affymetrix protocol (www.affymetrix.com)
Description AM14 B cells, PL2-3 treated
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings in Genedata Expressionist and global scaling with mask correction as normalization method. The mean target intensity of each array was arbitrarily set to 1500.
 
Submission date Jan 08, 2007
Last update date Aug 28, 2018
Contact name Jason W Bauer
E-mail(s) baue0271@umn.edu
Phone 612-625-5168
Organization name University of Minnesota
Street address 420 Deleware St SE MMC108
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
 
Platform ID GPL1261
Series (1)
GSE6674 Gene expression program of AM-14 B cells stimulated through the B cell receptor (BCR) and/or Toll-like receptors (TLR)
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF Affymetrix Probe Set ID
VALUE scaled Affymetrix intensity units

Data table
ID_REF VALUE
1415670_at 5847
1415671_at 10321.75
1415672_at 13666.73
1415673_at 4092.66
1415674_a_at 7646.92
1415675_at 4109.06
1415676_a_at 28398.03
1415677_at 639.44
1415678_at 6934.8
1415679_at 16826.72
1415680_at 5524.86
1415681_at 5369.83
1415682_at 2778.62
1415683_at 15696.42
1415684_at 2020.22
1415685_at 1386.74
1415686_at 4041.83
1415687_a_at 32979.23
1415688_at 11171.92
1415689_s_at 1903.55

Total number of rows: 45101

Table truncated, full table size 813 Kbytes.




Supplementary file Size Download File type/resource
GSM154254.CEL.gz 6.2 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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