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Sample GSM154258 Query DataSets for GSM154258
Status Public on Dec 01, 2007
Title AM14 B cells, anti-IgM+CpG, rep3
Sample type RNA
 
Source name Murine AM-14 B cells
Organism Mus musculus
Characteristics Splenic B cells from MRL/+ AM14 mice
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Standard Qiagen RNeasy mini kit protocol (www.qiagen.com)
Label Biotin
Label protocol Standard Ambion aRNA Message Amp protocols (www.ambion.com)
 
Hybridization protocol Standard Affymetrix protocol (www.affymetrix.com)
Scan protocol Standard Affymetrix protocol (www.affymetrix.com)
Description AM14 B cells, anti-IgM+CpG treated
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings in Genedata Expressionist and global scaling with mask correction as normalization method. The mean target intensity of each array was arbitrarily set to 1500.
 
Submission date Jan 08, 2007
Last update date Aug 28, 2018
Contact name Jason W Bauer
E-mail(s) baue0271@umn.edu
Phone 612-625-5168
Organization name University of Minnesota
Street address 420 Deleware St SE MMC108
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
 
Platform ID GPL1261
Series (1)
GSE6674 Gene expression program of AM-14 B cells stimulated through the B cell receptor (BCR) and/or Toll-like receptors (TLR)
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF Affymetrix Probe Set ID
VALUE scaled Affymetrix intensity units

Data table
ID_REF VALUE
1415670_at 6866.33
1415671_at 10163.21
1415672_at 15343.77
1415673_at 4835.38
1415674_a_at 11051.82
1415675_at 7737.36
1415676_a_at 30022.46
1415677_at 796.8
1415678_at 11236.11
1415679_at 25398.5
1415680_at 6596.11
1415681_at 11488.3
1415682_at 3978.92
1415683_at 24912.91
1415684_at 2601.19
1415685_at 1171.89
1415686_at 3370.64
1415687_a_at 30193.79
1415688_at 13488.72
1415689_s_at 2112.94

Total number of rows: 45101

Table truncated, full table size 806 Kbytes.




Supplementary file Size Download File type/resource
GSM154258.CEL.gz 5.7 Mb (ftp)(http) CEL
Raw data provided as supplementary file

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