|
Status |
Public on Mar 31, 2015 |
Title |
BTN_B3 |
Sample type |
RNA |
|
|
Source name |
MODE-K cells, transduced with Btnl1, TNF+IL-1_, 18h
|
Organism |
Mus musculus |
Characteristics |
strain: C3H/He genotype: female cell line: SV40 T transformed intestinal epithelial cell line retroviral vector: pMX-Btnl1-IRES-GFP
|
Treatment protocol |
MODE-K cells were stimulated with unstimulated or stimulated (on anti-CD3) cultured IEL supernatant or a combination of TNF (1 µg/ml) and IL-1_ (100 pg/ml) for 18 hours.
|
Growth protocol |
MODE-K cells stably transfected with Btnl1 or vector alone were seeded in 6-well plates the day before the experiment.
|
Extracted molecule |
total RNA |
Extraction protocol |
Total RNA was extracted using a Qiagen RNEasy extraction kit.
|
Label |
biotin
|
Label protocol |
Standard Illumina biotin labelling protocol
|
|
|
Hybridization protocol |
Standard Illumina hybridization protocol
|
Scan protocol |
Standard Illumina scanning protocol
|
Description |
replicate 3 5511176031_A
|
Data processing |
Quantile normalization with no Background subtraction using Genome Studio.
|
|
|
Submission date |
Nov 17, 2014 |
Last update date |
Mar 31, 2015 |
Contact name |
Lucie Abeler-Dörner |
Organization name |
King's College London
|
Department |
Immunobiology
|
Lab |
Hayday
|
Street address |
Great Maze Pond
|
City |
London |
ZIP/Postal code |
SE1 9RT |
Country |
United Kingdom |
|
|
Platform ID |
GPL6885 |
Series (1) |
GSE63364 |
In vitro activation of Btnl-1 transduced MODE-K cells with different stimuli |
|