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Sample GSM1562890 Query DataSets for GSM1562890
Status Public on Jan 27, 2016
Title Hs_soft-tissue_MRT (hEC._.INI110)
Sample type RNA
 
Source name Malignant Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: MRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_soft-tissue_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 13, 2018
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.545966645
10_at 2.148020996
100_at 3.473770606
1000_at 3.161008654
10000_at 4.85001521
100009676_at 2.120234123
10001_at 8.198156869
10002_at 2.413990666
10003_at 2.698786178
10004_at 2.262829333
100048912_at 2.214581561
100049716_at 2.843516775
10005_at 3.998332216
10006_at 8.748526288
10007_at 9.134091044
10008_at 2.439030935
10009_at 7.309860188
100093630_at 10.81150091
1001_at 9.032351747
10010_at 6.00894707

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562890_MD04_ARN0025_s1h1_U133p2.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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