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Sample GSM1562891 Query DataSets for GSM1562891
Status Public on Jan 27, 2016
Title Hs_soft-tissue_MRT (hEC._.INI116)
Sample type RNA
 
Source name Malignant Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: MRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_soft-tissue_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 13, 2018
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.71547919
10_at 2.174418948
100_at 3.979900886
1000_at 3.278025863
10000_at 4.748869156
100009676_at 2.151365295
10001_at 8.944824594
10002_at 2.447539861
10003_at 2.782165919
10004_at 2.313612982
100048912_at 2.252704159
100049716_at 2.544066837
10005_at 3.476829438
10006_at 9.40866066
10007_at 9.309128685
10008_at 2.479845514
10009_at 7.321431052
100093630_at 10.35057304
1001_at 8.155574465
10010_at 6.977384616

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562891_MD04_ARN0030_s1h1_U133p2.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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