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Sample GSM1562892 Query DataSets for GSM1562892
Status Public on Jan 27, 2016
Title Hs_soft-tissue_MRT (hEC._.INI119)
Sample type RNA
 
Source name Malignant Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: MRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_soft-tissue_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 13, 2018
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.397461676
10_at 2.134674883
100_at 6.12377558
1000_at 3.395877744
10000_at 3.436980884
100009676_at 2.105169427
10001_at 7.155769504
10002_at 2.393556318
10003_at 2.67118051
10004_at 2.247335388
100048912_at 2.19563811
100049716_at 2.427583988
10005_at 4.615375609
10006_at 8.855054542
10007_at 8.870558989
10008_at 2.413239635
10009_at 6.910240523
100093630_at 10.99884019
1001_at 3.077905892
10010_at 6.794461749

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562892_MD04_ARN0036_s1h1_U133p2.CEL.gz 4.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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