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Sample GSM1562893 Query DataSets for GSM1562893
Status Public on Jan 27, 2016
Title Hs_soft-tissue_MRT (hEC._.INI18)
Sample type RNA
 
Source name Malignant Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: MRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_soft-tissue_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 13, 2018
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.410928672
10_at 2.129796603
100_at 6.141568473
1000_at 2.785932999
10000_at 3.440622778
100009676_at 2.108439024
10001_at 7.734150988
10002_at 2.392456869
10003_at 2.639433586
10004_at 2.241520619
100048912_at 2.19022566
100049716_at 2.412360307
10005_at 5.351230729
10006_at 8.262318651
10007_at 8.930142927
10008_at 2.421081747
10009_at 7.285861028
100093630_at 10.25111111
1001_at 2.5798024
10010_at 7.466547923

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562893_INI18b_s1p1h1_.CEL.gz 7.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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